2017

  1. Ł. Marcinkowski, E. Szepiński, A. Kloskowski, J. Namieśnik, D. Warmińska. Solvation of ionic liquids based on N-alkyl-N-methylmorpholinium cations in N,N-dimethylformamide and dimethyl sulfoxide – A volumetric and acoustic study. J. Chem. Thermodyn. 2017, 104, 91–102. [URL]

2016

  1. J. Gębicki, A. Kloskowski, W. Chrzanowski, P. Stepnowski, J. Namieśnik. Application of Ionic Liquids in Amperometric Gas Sensors. Crit. Rev. Anal. Chem. 2016, 46, 122–138. [URL]

  2. M. Śmiechowski. Anion–water interactions of weakly hydrated anions: molecular dynamics simulations of aqueous NaBF4 and NaPF6. Mol. Phys. 2016, 114, 1831–1846. [URL]

  3. M. Bratychak, O. Ivashkiv, P. Bruzdziak, J. Namiesnik, O. Shyshchak. Cross-linked epoxy-isocyanate blends containing Epidian-6 modified by glycols. Polimery 2016, 61, 316–321. [URL]

  4. M. Kogut, C. Kleist, J. Czub. Molecular dynamics simulations reveal the balance of forces governing the formation of a guanine tetrad–a common structural unit of G-quadruplex DNA. Nucleic Acids Res. 2016, 44, 3020–3030. [URL]

  5. A. Neumann, M. Wieczor, J. Zielinska, M. Baginski, J. Czub. Membrane Sterols Modulate the Binding Mode of Amphotericin B without Affecting Its Affinity for a Lipid Bilayer. Langmuir 2016, 32, 3452–3461. [URL]

  6. P. Bruździak, A. Panuszko, M. Jourdan, J. Stangret. Protein thermal stabilization in aqueous solutions of osmolytes. Acta Biochim. Pol. 2016, 63, 65–70. [URL]

  7. T. Laskowski, J. Czub, P. Sowiński, J. Mazerski. Intercalation complex of imidazoacridinone C-1311, a potential anticancer drug, with DNA helix d(CGATCG)2: stereostructural studies by 2D NMR spectroscopy. J. Biomol. Struct. Dyn. 2016, 34, 653–663. [URL]

  8. W. Delewski, B. Paterkiewicz, M. Manicki, B. Schilke, B. Tomiczek, S. J. Ciesielski, L. Nierzwicki, J. Czub, R. Dutkiewicz, E. A. Craig, J. Marszalek. Iron–Sulfur Cluster Biogenesis Chaperones: Evidence for Emergence of Mutational Robustness of a Highly Specific Protein–Protein Interaction. Mol. Biol. Evol. 2016, 33, 643–656. [URL]

  9. M. Śmiechowski, C. Schran, H. Forbert, D. Marx. Correlated Particle Motion and THz Spectral Response of Supercritical Water. Phys. Rev. Lett. 2016, 116, 027801. [URL]

  10. J. Zielińska, M. Wieczór, T. Bączek, M. Gruszecki, J. Czub. Thermodynamics and kinetics of amphotericin B self-association in aqueous solution characterized in molecular detail. Sci. Rep. 2016, 6, 19109. [URL]

  11. B. Adamczak, M. Wieczór, M. Kogut, J. Stangret, J. Czub. Molecular basis of the osmolyte effect on protein stability: a lesson from the mechanical unfolding of lysozyme. Biochem. J. 2016, 473, 3705–3724. [URL]

  12. A. Panuszko, P. Bruździak, E. Kaczkowska, J. Stangret. General Mechanism of Osmolytes’ Influence on Protein Stability Irrespective of the Type of Osmolyte Cosolvent. J. Phys. Chem. B 2016, 120, 11159–11169. [URL]

  13. M. Bratychak, O. Iatsyshyn, P. Bruzdziak, J. Namiesnik, O. Shyshchak. Synthesis and properties of carboxy derivative of Epidian 6 monomethacrylate. Polimery 2016, 61, 766–772. [URL]

  14. K. Szwarc, M. Płosiński, K. Czerniejewska, T. Laskowski, A. Leniak, J. Czub, P. Kubica, P. Sowiński, J. Pawlak, E. Borowski. Intramolecular transformation of an antifungal antibiotic nystatin A1 into its isomer, iso-nystatin A1 – structural and molecular modeling studies. Magn. Reson. Chem. 2016, 54, 953–961. [URL]

  15. A. Nowak-Zaleska, M. Wieczór, J. Czub, Ł. Nierzwicki, R. Kotłowski, A. Mikucka, E. Gospodarek. Correlation between the number of Pro–Ala repeats in the EmrA homologue of Acinetobacter baumannii and resistance to netilmicin, tobramycin, imipenem and ceftazidime. J. Glob. Antimicrob. Resist. 2016, 7, 145–149. [URL]

2015

  1. M. Śmiechowski. Molecular hydrogen solvated in water – A computational study. J. Chem. Phys. 2015, 143, 244505. [URL]

  2. A. Panuszko, B. Adamczak, J. Czub, E. Gojło, J. Stangret. Hydration of amino acids: FTIR spectra and molecular dynamics studies. Amino Acids 2015, 47, 2265–2278. [URL]

  3. F. Pena-Pereira, Ł. Marcinkowski, A. Kloskowski, J. Namieśnik. Ionogel fibres of bis(trifluoromethanesulfonyl)imide anion-based ionic liquids for the headspace solid-phase microextraction of chlorinated organic pollutants. Analyst 2015, 140, 7417–7422. [URL]

  4. Ł. Marcinkowski, F. Pena-Pereira, A. Kloskowski, J. Namieśnik. Opportunities and shortcomings of ionic liquids in single-drop microextraction. Trac-Trends Anal. Chem. 2015, 72, 153–168. [URL]

  5. P. Bruździak, B. Adamczak, E. Kaczkowska, J. Czub, J. Stangret. Are stabilizing osmolytes preferentially excluded from the protein surface? FTIR and MD studies. Phys. Chem. Chem. Phys. 2015, 17, 23155–23164. [URL]

  6. F. Pena-Pereira, A. Kloskowski, J. Namieśnik. Perspectives on the replacement of harmful organic solvents in analytical methodologies: a framework toward the implementation of a generation of eco-friendly alternatives. Green Chem. 2015, 17, 3687–3705. [URL]

  7. Ł. Marcinkowski, A. Kloskowski, J. Czub, J. Namieśnik, D. Warmińska. Solvation of ionic liquids based on N-methyl-N-alkyl morpholinium cations in dimethylsulfoxide – volumetric and compressibility studies. J. Chem. Thermodyn. 2015, 88, 36–43. [URL]

  8. Ł. Nierzwicki, J. Czub. Specific Binding of Cholesterol to the Amyloid Precursor Protein: Structure of the Complex and Driving Forces Characterized in Molecular Detail. J. Phys. Chem. Lett. 2015, 6, 784–790. [URL]

  9. Ł. Marcinkowski, A. Kloskowski, A. Spietelun, J. Namieśnik. Evaluation of polycaprolactone as a new sorbent coating for determination of polar organic compounds in water samples using membrane-SPME. Anal. Bioanal. Chem. 2015, 407, 1205–1215. [URL]

  10. L. Nierzwicki, M. Wieczor, V. Censi, M. Baginski, L. Calucci, S. Samaritani, J. Czub, C. Forte. Interaction of cisplatin and two potential antitumoral platinum (II) complexes with a model lipid membrane: a combined NMR and MD study. Phys. Chem. Chem. Phys. 2015, 17, 1458–1468. [URL]

2014

  1. A. Kuffel, D. Czapiewski, J. Zielkiewicz. Unusual structural properties of water within the hydration shell of hyperactive antifreeze protein. J. Chem. Phys. 2014, 141, 055103. [URL]

  2. F. Pena-Pereira, Ł. Marcinkowski, A. Kloskowski, J. Namieśnik. Silica-Based Ionogels: Nanoconfined Ionic Liquid-Rich Fibers for Headspace Solid-Phase Microextraction Coupled with Gas Chromatography–Barrier Discharge Ionization Detection. Anal. Chem. 2014, 86, 11640–11648. [URL]

  3. J. Starzyk, M. Gruszecki, K. Tutaj, R. Luchowski, R. Szlazak, P. Wasko, W. Grudzinski, J. Czub, W. I. Gruszecki. Self-Association of Amphotericin B: Spontaneous Formation of Molecular Structures Responsible for the Toxic Side Effects of the Antibiotic. J. Phys. Chem. B 2014, 118, 13821–13832. [URL]

  4. J. Czub, H. Grubmüller. Rotation Triggers Nucleotide-Independent Conformational Transition of the Empty β Subunit of F1-ATPase. J. Am. Chem. Soc. 2014, 136, 6960–6968. [URL]

  5. Ł. Marcinkowski, T. Olszewska, A. Kloskowski, D. Warmińska. Apparent Molar Volumes and Expansivities of Ionic Liquids Based on N-Alkyl-N-methylmorpholinium Cations in Acetonitrile. J. Chem. Eng. Data 2014, 59, 718–725. [URL]

  6. Ł. Marcinkowski, A. Kloskowski, J. Namieśnik. Physical and Thermophysical Properties of 1-Hexyl-1,4-diaza[2.2.2]bicyclooctanium Bis(trifluoromethylsulfonyl)imide Ionic Liquid. J. Chem. Eng. Data 2014, 59, 585–591. [URL]

  7. M. Wieczór, P. Wityk, J. Czub, L. Chomicz, J. Rak. A first-principles study of electron attachment to the fully hydrated bromonucleobases. Chem. Phys. Lett. 2014, 595–596, 133–137. [URL]

  8. M. Wieczór, A. Tobiszewski, P. Wityk, B. Tomiczek, J. Czub. Molecular Recognition in Complexes of TRF Proteins with Telomeric DNA. PLoS ONE 2014, 9, e89460. [URL]

  9. Ł. Marcinkowski, A. Kloskowski, J. Namieśnik. Measurement of activity coefficients at infinite dilution of organic solutes in the ionic liquid 1-hexyl-1,4-diaza[2.2.2]bicyclooctanium bis(trifluoromethylsulfonyl)imide using gas–liquid chromatography. J. Chem. Thermodyn. 2014, 71, 84–90. [URL]

  10. J. Wawer, J. Krakowiak, M. Szociński, Z. Lustig, M. Olszewski, K. Szostak. Inhibition of amyloid fibril formation of hen egg white lysozyme by trimethylamine N-oxide at low pH. Int. J. Biol. Macromol. 2014, 70, 214–221. [URL]

  11. J. Krakowiak, J. Wawer. Hydration of urea and its derivatives – Volumetric and compressibility studies. J. Chem. Thermodyn. 2014, 79, 109–117. [URL]

2013

  1. A. Spietelun, A. Kloskowski, W. Chrzanowski, J. Namieśnik. Understanding Solid-Phase Microextraction: Key Factors Influencing the Extraction Process and Trends in Improving the Technique. Chem. Rev. 2013, 113, 1667–1685. [URL]

  2. D. Warmińska, H. Koziel, W. Grzybkowski. Volumetric properties of zinc(II) chloride in N,N-dimethylacetamide and dimethylsulfoxide. J. Mol. Liq. 2013, 177, 252–256. [URL]

  3. J. Gębicki, A. Kloskowski, W. Chrzanowski. Prototype of electrochemical sensor for measurements of volatile organic compounds in gases. Sens. Actuator B-Chem. 2013, 177, 1173–1179. [URL]

  4. A. Neumann, M. Bagiński, S. Winczewski, J. Czub. The effect of sterols on amphotericin B self-aggregation in a lipid bilayer as revealed by free energy simulations. Biophys. J. 2013, 104, 1485–1494. [URL]

  5. A. Spietelun, Ł. Marcinkowski, A. Kloskowski, J. Namieśnik. Determination of volatile organic compounds in water samples using membrane-solid phase microextraction (M-SPME) (headspace version). Analyst 2013, 138, 5099–5106. [URL]

  6. P. Bruździak, A. Panuszko, J. Stangret. Influence of Osmolytes on Protein and Water Structure: A Step To Understanding the Mechanism of Protein Stabilization. J. Phys. Chem. B 2013, 117, 11502–11508. [URL]

  7. A. Kuffel, J. Zielkiewicz. Properties of water in the region between a tubulin dimer and a single motor head of kinesin. Phys. Chem. Chem. Phys. 2013, 15, 4527–4537. [URL]

  8. J. Krakowiak, J. Wawer, A. Panuszko. The hydration of the protein stabilizing agents: Trimethylamine-N-oxide, glycine and its N-methylderivatives – The volumetric and compressibility studies. J. Chem. Thermodyn. 2013, 60, 179–190. [URL]

  9. J. Krakowiak, J. Wawer, A. Panuszko. Densimetric and ultrasonic characterization of urea and its derivatives in water. J. Chem. Thermodyn. 2013, 58, 211–220. [URL]

  10. D. Warmińska, A. Fuchs, D. Lundberg. Apparent molar volumes and compressibilities of lanthanum, gadolinium, lutetium and sodium trifluoromethanesulfonates in N,N-dimethylformamide and N,N-dimethylacetamide. J. Chem. Thermodyn. 2013, 58, 46–54. [URL]

  11. A. Fuchs, D. Lundberg, D. Warmińska, I. Persson. On the Structure and Volumetric Properties of Solvated Lanthanoid(III) Ions in Amide Solutions. J. Phys. Chem. B 2013, 117, 8502–8511. [URL]

  12. B. Zalewska-Piątek, S. Wilkanowicz, P. Bruździak, R. Piątek, J. Kur. Biochemical characteristic of biofilm of uropathogenic Escherichia coli Dr+ strains. Microbiol. Res. 2013, 168, 367–378. [URL]

2012

  1. A. Kuffel, J. Zielkiewicz. The importance of the shape of the protein-water interface of a kinesis motor domain for dynamics of the surface atoms of the protein. Phys. Chem. Chem. Phys. 2012, 14, 5561–5569. [URL]

  2. A. Kuffel, J. Zielkiewicz. Why the Solvation Water around Proteins is More Dense than Bulk Water. J.Phys. Chem. B 2012, 116, 12113–12124. [URL]

  3. A. Panuszko, M. Wojciechowski, P. Bruździak, P. W. Rakowska, J. Stangret. Characteristics of hydration water around hen egg lysozyme as the protein model in aqueous solution. FTIR spectroscopy and molecular dynamics simulation. Phys. Chem. Chem. Phys. 2012, 14, 15765–15773. [URL]

  4. P. Bruździak, P. W. Rakowska, J. Stangret. Chemometric Method of Spectra Analysis Leading to Isolation of Lysozyme and CtDNA Spectra Affected by Osmolytes. Appl. Spectrosc. 2012, 66, 1302–1310. [URL]

  5. H. Staroszczyk, J. Pielichowska, K. Sztuka, J. Stangret, I. Kołodziejska. Molecular and structural characteristics of cod gelatin films modified with EDC and TGase. Food Chem. 2012, 130, 335–345. [URL]

  6. D. Warmińska. Volumetric and acoustic properties of D-mannitol in aqueous sodium or magnesium(II) chloride solutions over temperature range of 293.15 to 313.15 K. Carbohydr. Res. 2012, 349, 44–51. [URL]

  7. D. Warmińska, J. Stangret. Application of the tetraphenylphosphonium tetraphenylborate (TPTB) assumption to the thermodynamic properties of solvated ions in dimethylsulfoxide. Phys. Chem. Chem. Phys. 2012, 14, 3176–3180. [URL]

  8. J. Gębicki, A. Kloskowski, I. Kwiatkowska, W. Chrzanowski. Elektrochemiczny czujnik na bazie cieczy jonowej do oznaczania par benzaldehydu. Elektronika - konstrukcje, technologie, zastosowania 2012, 53, 19–20. [URL]

  9. J. Krakowiak, J. Wawer, A. Farmas. Apparent molar volumes and compressibilities of electrolytes and ions in gamma-butyrolactone. J. Chem. Thermodyn. 2012, 54, 412–420. [URL]

  10. A. Dołęga, W. Marynowski, K. Baranowska, M. Śmiechowski, J. Stangret. Intramolecular interactions in crystals of tris(2,6-diisopropylphenoxy)silanethiol and its sodium salts. Inorg. Chem. 2012, 51, 836–843. [URL]

  11. J. Krakowiak. Densimetric and ultrasonic characterization of pentaerythritol in water and in aqueous NaCl and MgCl2 solutions at different temperatures. J. Chem. Thermodyn. 2012, 54, 444–452. [URL]

  12. J. Krakowiak, D. Lundberg, I. Persson. A coordination chemistry study of hydrated and solvated cationic vanadium ions in oxidation states +III, +IV, and +V in solution and solid state. Inorg. Chem. 2012, 51, 9598–9609. [URL]

  13. D. Warmińska, J. Wawer. Apparent molar volumes and compressibilities of lanthanum, gadolinium and lutetium trifluoromethanesulfonates in dimethylsulfoxide. J. Chem. Thermodyn. 2012, 55, 79–84. [URL]